rs16860727 chr1:183272646 G>A

Sequence
agagctttggttcaagaatccaaa[G/A]tgaaagaaagagcaaaactgactc
ASB in cell types
BEAS-2B (bronchial epithelium)
ASB for transcription factors
GCR_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GCR_HUMAN 0.96 0.25 1.6·10-31.00 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP bipolar disorder childhood acute lymphoblastic leukemia hdl cholesterol major depressive disorder
GTEx eQTL Artery_Aorta Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Nerve_Tibial Pituitary Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Testis Thyroid

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