rs16979569 chr19:14348784 C>A

Sequence
ttctcctccacaacccacttttcc[C/A]ggctgccatttcccagctagaact
ASB in cell types
HEK293 (embryonic kidney) LUHMES (lund human mesencephalic cells)
ASB for transcription factors
CTCF_HUMAN TYY1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.62 1.05 1.000.01 1.23 n/a No Hit
TYY1_HUMAN 2.48 n/a 0.021.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd asthma hdl cholesterol prop taste detection threshold
GTEx eQTL Colon_Transverse Small_Intestine_Terminal_Ileum

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