rs55951265 chr14:49868395 C>G
- Sequence
aattacccagcgtgagctcggtca[C/G]ctgggtgtggcggttcaaccctga
- ASB in cell types
- CD14+ monocytes primary B-CLL cells fetal bone marrow-derived mononuclear cells monocytes from periferal blood
- ASB for transcription factors
- STAT1_HUMAN BRD4_HUMAN ESR1_HUMAN SRBP2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.42 | n/a | 2.00 | n/a | No Hit | |||
| BRD4_HUMAN | 2.08 | -0.57 | 1.33 | n/a | n/a | |||
| ESR1_HUMAN | 1.02 | 0.01 | 2.00 | -0.09 | Weak Concordant | |||
| SRBP2_HUMAN | 2.37 | n/a | 3.00 | -1.99 | Weak Concordant |
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Motif analysis
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Muscle_Skeletal, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid