rs56272941 chr12:102702636 T>C
- Sequence
tggtataaactggagaaagcactt[T/C]gttcagttaaagattttttttctt
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.27 | 3.47 | 1.75 | n/a | No Hit | |||
| STAG1_HUMAN | 0.05 | 3.18 | 1.25 | n/a | n/a |
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