rs56352510 chr6:107028472 T>G
- Sequence
gcgaagccttccgttcctgcctcc[T/G]gtcgctcctgctggctccgaatgc
- ASB in cell types
- MCF-7 C4-12 (invasive breast ductal carcinoma)
- ASB for transcription factors
- ZFX_HUMAN PKNX1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -1.16 | 2.66 | 1.00 | n/a | No Hit | |||
| PKNX1_HUMAN | 1.89 | -3.16 | 1.50 | -3.70 | Concordant |
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Motif analysis
