rs56384466 chr4:73523273 T>C
- Sequence
actttccaggtatttggaaggact[T/C]gggtattgtgatctaagtcttata
- ASB in cell types
- GM12891 (male B- cells lymphoblastoid cell line) GM19238 (female B-cells lymphoblastoid cell lines) GM12878 (female B-cells lymphoblastoid cell line) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.35 | 0.17 | 1.33 | n/a | No Hit | |||
| STAG1_HUMAN | 1.08 | 0.20 | 1.12 | n/a | n/a |
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