rs56681401 chr1:197995436 A>T
- Sequence
aaaattttggtaagcaaatgctaa[A/T]ttgtgcaacaattccagacagcta
- ASB in cell types
- HepG2 (hepatoblastoma) A549 (lung carcinoma) liver
- ASB for transcription factors
- CEBPA_HUMAN EP300_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPA_HUMAN | 2.69 | -4.16 | 1.25 | -4.04 | Concordant | |||
| EP300_HUMAN | 3.01 | n/a | 2.00 | n/a | n/a |
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Motif analysis
