rs57453899 chr7:50212812 G>A
- Sequence
agtatatgacagagtacccagcag[G/A]ggacagagtggggctggccctgag
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM19238 (female B-cells lymphoblastoid cell lines) GM18951 (B-cells Lymphoblastoid Cell Lines) GM02610 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.83 | -0.18 | 1.22 | -0.90 | Weak Concordant | |||
| STAG1_HUMAN | 2.71 | -0.23 | 1.20 | n/a | n/a |
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Motif analysis
