rs57527380 chr20:50803246 A>C
- Sequence
cccatcagtgcgggccagtgccat[A/C]gcgattcttctgatgagtggagca
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- KAISO_HUMAN Z512B_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| KAISO_HUMAN | 2.73 | n/a | 2.00 | 4.46 | Discordant | |||
| Z512B_HUMAN | n/a | 2.86 | 4.00 | n/a | n/a |
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Motif analysis
