rs58016205 chr19:39194124 G>C

Sequence
tgggaatctgctggggacttccag[G/C]tgcagtatttgttgatctgctccc
ASB for transcription factors
TF65_HUMAN
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View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 2.44 -0.05 2.3·10-31.00 2.00 -0.85 Weak Concordant
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Motif analysis

TF65_HUMAN Weak Concordant
TF65_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta,  Brain_Cerebellar_Hemisphere,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Lung,  Pancreas,  Prostate,  Small_Intestine_Terminal_Ileum,  Spleen,  Stomach,  Testis,  Thyroid

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