rs15915 chr5:58460016 C>T
- Sequence
accccctaggcgcggtcacacgtc[C/T]gagccggccgtggtcctcgcaccc
- ASB in cell types
- A549 (lung carcinoma) HepG2 (hepatoblastoma) CD14+ monocytes
- ASB for transcription factors
- JUN_HUMAN BCL3_HUMAN RAD21_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | 1.39 | -0.26 | 2.00 | n/a | No Hit | |||
| BCL3_HUMAN | 1.45 | -0.07 | 2.00 | n/a | n/a | |||
| RAD21_HUMAN | 1.06 | 0.48 | 1.93 | n/a | n/a | |||
| STAT1_HUMAN | 0.96 | -3.47 | 2.50 | n/a | No Hit |
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