ADASTRA v1.6.10
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rs267287
chr5:115309892
G
>
A
Sequence
aacttctttaatgacttcctacca[G/A]tggaatttgagaacctcacctttc
ASB in cell types
22RV1 (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.32
0.73
1.00
0.05
1.45
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
diastolic blood pressure (dbp)
,
fasting blood glucose
,
height
,
homa-b
GTEx eQTL
Adipose_Visceral_Omentum
,
Breast_Mammary_Tissue
,
Colon_Transverse
,
Esophagus_Muscularis
,
Muscle_Skeletal
,
Nerve_Tibial
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)