ADASTRA v1.6.10
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rs283623
chr5:73902824
G
>
A
Sequence
tggcttttgggcataagtaaccgc[G/A]ggtagcacagtccaactcatttct
ASB in cell types
A549 (lung carcinoma)
ASB for transcription factors
RAD21_HUMAN
SMC3_HUMAN
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
1.21
0.55
3.5·10
-4
0.58
1.70
n/a
n/a
SMC3_HUMAN
1.01
0.26
0.03
0.47
1.83
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
2 hour glucose
,
asthma
,
hip bone mineral density (bmd)
,
neuroblastoma (brain cancer)
,
severe diabetic retinopathy
,
sporadic creutzfeldt-jakob disease
,
stabilized warfarin dose
GTEx eQTL
Esophagus_Muscularis
,
Heart_Left_Ventricle
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)