rs528782 chr6:23650309 A>G
- Sequence
aagagagtacaggatgagctgtga[A/G]caactttagatttgggagggatgc
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| VCaP (prostate carcinoma) | 1.36 | -0.45 | 2.98 | |||
| LNCaP (prostate carcinoma) | 0.25 | 0.87 | 1.52 |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, common carotid artery thickness (average of near and far wall measures), hdl cholesterol, internal carotid artery thickness (average of near and far walls), triglycerides