ADASTRA v1.6.10
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rs609018
chr12:3962735
T
>
G
Sequence
cctaaccaacaatttctccttcac[T/G]gccagtttgagataagcagccacc
ASB in cell types
CD34+ hematopoietic stem cells-derived proerythroblasts
foreskin keratinocyte
ASB for transcription factors
GATA1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GATA1_HUMAN
2.86
n/a
1.4·10
-7
1.00
2.00
-2.61
Concordant
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5
1 – 1 of 1
Motif analysis
GATA1_HUMAN
Concordant
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Genetic associations
EMBL-EBI
eosinophil counts
,
mean corpuscular hemoglobin
,
red blood cell count
GRASP
aortic valve calcium
,
longstanding arthritis
,
lp-pla2 activity
,
tetrology of fallot
GTEx eQTL
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)
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