rs1000312 chr1:205536349 G>A
- Sequence
gagcagcagcaggtgtggtgggaa[G/A]ggagaagggaagcacctgctctcc
- ASB in cell types
- keratinocytes MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- SNAI2_HUMAN ESR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | -5.21 | 3.32 | 1.50 | n/a | No Hit | |||
| ESR1_HUMAN | 0.04 | 1.06 | 1.91 | n/a | No Hit |
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