rs1001549 chr20:354581 G>T
- Sequence
tggccgtgaccctgataataaatg[G/T]gctctctcagaggcgccagcccct
- ASB in cell types
- neutrophils epidermal keratinocytes 22RV1 (prostate carcinoma)
- ASB for transcription factors
- JUN_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| JUN_HUMAN | -0.29 | 1.38 | 1.62 | n/a | No Hit | |||
| ANDR_HUMAN | 2.60 | -1.82 | 2.00 | n/a | No Hit |
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