rs1002400 chr21:37271284 G>T

Sequence
ttaatgtacttgcccaaggtcata[G/T]agcaactaagtggcagccaccaat
ASB in cell types
SK-BR-3 (breast adenocarcinoma)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
SK-BR-3 (breast adenocarcinoma) 1.25 -0.04 0.031.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP birth weight,  partial epilepsy,  refractive error,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Breast_Mammary_Tissue,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Small_Intestine_Terminal_Ileum,  Thyroid

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