rs1003462 chr7:134369142 C>T
- Sequence
aattcctttatctgcattatttaa[C/T]attaaccaggcactgcccagacct
- ASB in cell types
- HepG2 (hepatoblastoma) liver
- ASB for transcription factors
- FOXA2_HUMAN SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 1.48 | 0.85 | 1.48 | 1.32 | Weak Discordant | |||
| SP1_HUMAN | -0.19 | 2.42 | 1.50 | n/a | No Hit |
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Motif analysis
