rs1003927 chr5:143218049 G>A
- Sequence
agtaaggtcagcaaactatgacct[G/A]ccagtcaaatccaacccgccacct
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) GM01310 ( Transformed lymphovlasoid cell line )
- ASB for transcription factors
- FOXK2_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 2.97 | -0.69 | 1.75 | n/a | No Hit | |||
| AHR_HUMAN | 1.75 | -1.20 | 1.00 | n/a | No Hit |
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