rs1003994 chr20:10434637 C>T
- Sequence
cgggtttggaaaacggacatgcgc[C/T]gtgagagctagttgccttctacta
- ASB in cell types
- CTV-1 (Adult T acute lymphoblastic leukemia) GM12878 (female B-cells lymphoblastoid cell line) HL-60 (acute myeloid leukemia) naive IgD+ B cells
- ASB for transcription factors
- SPI1_HUMAN BC11B_HUMAN INT11_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPI1_HUMAN | 1.55 | 0.01 | 1.41 | n/a | No Hit | |||
| BC11B_HUMAN | 2.93 | -5.44 | 2.00 | n/a | n/a | |||
| INT11_HUMAN | 2.21 | -0.64 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 1.30 | 0.37 | 1.14 | n/a | No Hit | |||
| TBX21_HUMAN | 1.85 | -0.28 | 1.17 | n/a | No Hit |
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