rs1004001 chr6:33249224 A>G

Sequence
gcgagtcaggcggggtaaacccgg[A/G]gcaacgcggaggcggtgatctggg
ASB in cell types
K562 (myelogenous leukemia) pancreas
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.40 1.09 0.840.02 1.03 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  fasting blood glucose,  ldl cholesterol,  rheumatoid arthritis,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Muscle_Skeletal,  Skin_Not_Sun_Exposed_Suprapubic

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