rs1004441 chr2:11945669 G>A
- Sequence
ctgtacactcatatttacatgccc[G/A]catatgaaaagtaaaactgaaaca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MCF7 (Invasive ductal breast carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM12878 (female B-cells lymphoblastoid cell line) | 0.37 | 0.84 | 1.10 | |||
| MCF7 (Invasive ductal breast carcinoma) | -2.34 | 1.95 | 1.00 |
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