rs1004471 chr21:37338900 G>A
- Sequence
cacaaaataacacttgagaagcat[G/A]tgtcatgtcaaatgcagaacgtgt
- ASB in cell types
- HEK293 (embryonic kidney) HCASMC (Human coronary artery smooth muscle cells)
- ASB for transcription factors
- TCF21_HUMAN ZN600_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TCF21_HUMAN | 2.78 | n/a | 2.00 | 5.33 | Discordant | |||
| ZN600_HUMAN | 2.35 | n/a | 3.00 | n/a | n/a |
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Motif analysis
Genetic associations
GRASP aortic valve calcium, ldl cholesterol change with statins, microalbuminuria, refractive error, total cholesterol, total cholesterol change with statins