rs1004679 chr9:122464994 C>T

Sequence
tatactttcatttgctgcttgatt[C/T]ttttcttcctctatttctaaacat
ASB in cell types
Peyer's patch

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Peyer's patch 1.88 -0.80 0.021.00 1.25
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  hdl cholesterol change with statins,  obesity with early age of onset (age >2),  systolic blood pressure (sbp)
GTEx eQTL Adipose_Subcutaneous,  Brain_Cortex,  Brain_Frontal_Cortex_BA9,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Lung,  Skin_Sun_Exposed_Lower_leg

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