rs1004700 chr6:166463524 G>A

Sequence
ccgcagggctgaaacgaatttcac[G/A]ggaaacaagcgcacgtgaggaagc
ASB in cell types
THP-1 (acute monocytic leukemia)
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 2.08 -0.11 1.6·10-41.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP arthritis including non-rheumatoid,  ldl cholesterol change with statins,  longstanding arthritis
GTEx eQTL Adipose_Subcutaneous,  Cells_Cultured_fibroblasts,  Nerve_Tibial

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