ADASTRA v6.1.1
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rs1005948
chr19:35485019
G
>
A
Sequence
tccatttcctatcacctagtttgt[G/A]agtgcacaatcttcactaagtatt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
MEF2B_HUMAN
RELB_HUMAN
IKZF2_HUMAN
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View in UCSC Genome Browser
View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN
0.94
-0.94
1.9·10
-3
1.00
1.00
n/a
No Hit
RELB_HUMAN
2.69
-2.48
8.0·10
-3
1.00
1.00
n/a
No Hit
IKZF2_HUMAN
1.47
-0.74
0.04
1.00
1.00
n/a
n/a
Items per page:
5
1 – 3 of 3
Motif analysis
No data available
Genetic associations
GRASP
celiac disease
,
hdl cholesterol
,
hip bone mineral density (bmd)
,
lp-pla2 mass
,
mitral annular calcium
,
neuroticism
,
spine bone mineral density (bmd)
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)