rs1006081 chr6:109304347 T>C
- Sequence
gggaagggttctgccttagggtca[T/C]ggggatggctgaacacacaacacc
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) CTV-1 (Adult T acute lymphoblastic leukemia)
- ASB for transcription factors
- SPT5H_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SPT5H_HUMAN | 2.43 | -1.55 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, hdl cholesterol, height, mean corpuscular hemoglobin concentration (mchc), mean corpuscular volume (mcv), mitral annular calcium, obesity with early age of onset (age >2), paternal transmission distortion, red blood cell count (rbc), refractive error, serum creatinine, total cholesterol, transmission distortion, years of education
GTEx eQTL Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Mucosa, Esophagus_Muscularis, Lung, Muscle_Skeletal, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood