rs1006230 chr7:31373527 T>A
- Sequence
gttcctgcatgtccattctgttca[T/A]gccactaggggtcctcattggttt
- ASB in cell types
- T47D (invasive ductal carcinoma) prostate gland erythroid cells
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.02 | 0.51 | 1.27 | -0.26 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
Genetic associations
GRASP advanced age-related macular degeneration, advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, aortic valve calcium, diabetic retinopathy in type 2 diabetes mellitus