rs1006435 chr15:20356804 A>T
- Sequence
gagcgcccggctggctccctcagg[A/T]cccctcctccgggccttcgccctg
- ASB in cell types
- LNCaP (prostate carcinoma) 22RV1 (prostate carcinoma) GM19238 (female B-cells lymphoblastoid cell lines) GM12892 (female B-cells lymphoblastoid cell line)
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| LNCaP (prostate carcinoma) | 2.34 | -4.56 | 2.00 | |||
| 22RV1 (prostate carcinoma) | 1.98 | -3.26 | 2.25 | |||
| GM19238 (female B-cells lymphoblastoid cell lines) | 1.58 | -2.78 | 1.33 | |||
| GM12892 (female B-cells lymphoblastoid cell line) | -1.69 | 2.06 | 1.50 | |||
| glioblastoma cells | 2.01 | -1.39 | 1.33 |
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