rs1006829 chr7:21076822 C>G

Sequence
tgtataaaaccgcaacatgacccc[C/G]gtaggctcgattacctttccagca
ASB in cell types
breast tumor 22RV1 (prostate carcinoma)
ASB for transcription factors
ESR1_HUMAN ANDR_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ESR1_HUMAN -0.58 3.32 0.901.2·10-5 2.00 0.64 Weak Concordant
ANDR_HUMAN n/a 3.33 1.006.0·10-4 2.00 n/a No Hit
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Motif analysis

ESR1_HUMAN Weak Concordant
ESR1_HUMAN pic

Genetic associations

GRASP acute lung injury following major trauma,  advanced age-related macular degeneration,  birth weight,  ldl cholesterol change with statins,  parkinsons disease

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