rs1008709 chr5:59810350 G>A
- Sequence
gtcctaaagtgggatatggaacag[G/A]atggttcatgcccatttttacgta
- ASB in cell types
- A549 (lung carcinoma) foreskin keratinocyte neutrophils from periferal blood VCaP (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.72 | 0.87 | 1.33 | n/a | No Hit | |||
| FOXA1_HUMAN | -0.14 | 1.66 | 2.92 | n/a | No Hit |
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