rs1009171 chr11:58654430 T>C

Sequence
aaaatgttctagcaaaggaattat[T/C]cataagccagactacaagcagaat
ASB in cell types
LNCaP (prostate carcinoma) neural cell

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LNCaP (prostate carcinoma) 2.46 -2.13 2.6·10-51.00 1.00
neural cell 1.26 -0.52 0.021.00 1.00
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Motif analysis

No data available

Genetic associations

GRASP chronic kidney disease,  systolic blood pressure (sbp),  triglycerides
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Sigmoid,  Esophagus_Mucosa,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Testis,  Thyroid

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