rs1009372 chr2:42931878 T>G

Sequence
aacaaaccacacctaacgaaggtg[T/G]tttttcccctttaagagaatacat
ASB for transcription factors
CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.23 1.10 0.999.3·10-4 1.25 n/a No Hit
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP college completion,  diastolic blood pressure (dbp),  ldl cholesterol,  ldl cholesterol change with statins,  systolic blood pressure (sbp),  total cholesterol change with statins,  triglycerides change with statins,  waist hip ratio,  years of education
GTEx eQTL Pancreas

Download