rs1009730 chr22:33864750 C>T

Sequence
tttaagtggccaaagcccacagaa[C/T]agggctttccccagaggcccgtgg
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
SRF_HUMAN MEF2B_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SRF_HUMAN -2.33 2.58 1.000.01 1.00 n/a No Hit
MEF2B_HUMAN n/a 2.30 1.000.02 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP cystatin c in serum,  hdl cholesterol,  longstanding arthritis,  waist hip ratio
GTEx eQTL Artery_Tibial,  Cells_Cultured_fibroblasts,  Muscle_Skeletal

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