rs1009890 chr5:159902692 T>C
- Sequence
caagtttgtgtctcccacacaatc[T/C]gacatgatgcctggcacaaagccc
- ASB in cell types
- CFPAC-1(pancreatic ductal adenocarcinoma) A549 (lung carcinoma)
- ASB for transcription factors
- FOXA2_HUMAN EP300_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA2_HUMAN | 2.41 | -0.12 | 1.25 | n/a | No Hit | |||
| EP300_HUMAN | 1.64 | -0.30 | 2.50 | n/a | n/a |
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