rs1011300 chr12:110906526 A>G

Sequence
aattttctcttacaatgaccttgc[A/G]tgactttagtaagtaggggaaaaa
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
GM12878 (female B-cells lymphoblastoid cell line) 0.29 1.01 0.932.0·10-3 1.08
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP abnormal involuntary movement scale,  fasting blood glucose,  ldl cholesterol,  ldl cholesterol change with statins,  obesity with early age of onset (age >2),  parkinsons disease,  ulcerative colitis,  urinary albumin-to-creatinine ratio
GTEx eQTL Adipose_Visceral_Omentum,  Heart_Left_Ventricle,  Muscle_Skeletal,  Nerve_Tibial

Download