rs1012299 chr20:15949377 A>G
- Sequence
tgatatgtcattgaatcatcacca[A/G]atcaagaaatctattgatatgcta
- ASB in cell types
- LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -0.91 | 2.62 | 1.50 | n/a | No Hit |
Items per page:
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP chronic kidney disease, fasting insulin, homa-ir, ldl cholesterol, ldl cholesterol change with statins, serum creatinine, total cholesterol change with statins, triglycerides