rs1013170 chr16:54176535 G>A
- Sequence
ccgcctgcgctgaccttgagcagc[G/A]gtaaacggtcccatcgcaaaccgg
- ASB in cell types
- HepG2 (hepatoblastoma) breast tumor 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN MAX_HUMAN ANDR_HUMAN CREB1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 2.08 | n/a | 2.50 | n/a | No Hit | |||
| MAX_HUMAN | 1.76 | -0.83 | 1.67 | n/a | No Hit | |||
| ANDR_HUMAN | 2.01 | -0.98 | 2.00 | n/a | No Hit | |||
| CREB1_HUMAN | 1.29 | -0.58 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP cystatin c in serum, hypertension (early onset hypertension), late onset alzheimers disease, obesity with early age of onset (age >2)