rs1013256 chr2:1730552 C>A

Sequence
ttggctaaagggcagcaccgcagt[C/A]aggctcagggtatggcggacggcc
ASB in cell types
22RV1 (prostate carcinoma) CFPAC-1(pancreatic ductal adenocarcinoma)
ASB for transcription factors
ANDR_HUMAN FOXA2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ANDR_HUMAN 2.21 -1.01 8.7·10-31.00 2.00 n/a No Hit
FOXA2_HUMAN 1.28 -0.12 0.020.95 1.80 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP salmonella-induced pyroptosis
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Esophagus_Muscularis,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

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