rs1013497 chr20:11207835 T>C
- Sequence
tttggccttgctgtattttatgag[T/C]tattcttgtttccagcctaatacg
- ASB in cell types
- BIN-67 (Ovarian small cell carcinoma, hypercalcemic type) HepG2 (hepatoblastoma)
- ASB for transcription factors
- SMRC1_HUMAN RBM25_HUMAN SSXT_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SMRC1_HUMAN | -1.37 | 3.55 | 1.50 | n/a | n/a | |||
| RBM25_HUMAN | 2.74 | n/a | 1.00 | n/a | n/a | |||
| SSXT_HUMAN | -1.39 | 2.15 | 1.50 | n/a | n/a |
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