rs1014497 chr2:199376506 C>T
- Sequence
tgggggaaggggtatagtggcatg[C/T]tagtggcatctagtgggtaatgga
- ASB in cell types
- GM02255 (Lymphoblastoid Cell Lines) 2588 (Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.74 | -0.89 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 2.03 | -0.46 | 1.00 | -0.88 | Weak Concordant |
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Motif analysis
