rs10149476 chr14:106879456 C>A

Sequence
tacctcctggtagttctgagcgac[C/A]catggtagttccaatcagcatcta
ASB in cell types
HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
ASB for transcription factors
PKNX1_HUMAN ZN423_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
PKNX1_HUMAN n/a 1.54 1.004.5·10-17 4.00 3.62 Concordant
ZN423_HUMAN n/a 3.18 1.005.7·10-3 2.00 n/a No Hit
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Motif analysis

PKNX1_HUMAN Concordant
PKNX1_HUMAN pic

Genetic associations

GRASP college completion hdl cholesterol height ldl cholesterol change with statins total cholesterol change with statins waist hip ratio years of education
GTEx eQTL Stomach Whole_Blood

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