rs10152361 chr15:99510723 C>T
- Sequence
ggagaatcacttgaacccaggagg[C/T]ggaggcagtgagctgagattgcac
- ASB in cell types
- GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) GM19099 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | -1.70 | 2.58 | 1.11 | n/a | n/a | |||
| CTCF_HUMAN | -4.15 | 2.98 | 1.17 | 1.74 | Weak Concordant |
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Motif analysis
