rs10153560 chr2:25738714 A>G

Sequence
agaatgttaactgtcaggtcatta[A/G]tatgtatgactttgcaccttcacc
ASB for transcription factors
RARA_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -0.33 0.95 1.000.04 1.00 -0.50 Weak Discordant
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Motif analysis

RARA_HUMAN Weak Discordant
RARA_HUMAN pic

Genetic associations

GRASP body mass index (bmi),  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Artery_Tibial,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Spinal_cord_cervical_c-1,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Pituitary,  Thyroid

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