rs10153729 chr2:15591735 A>C

Sequence
gcgtccagaagccctaggtcccag[A/C]ggtccgctcagcggcaggcgcata
ASB in cell types
fetal bone marrow-derived mononuclear cells A549 (lung carcinoma)
ASB for transcription factors
KMT2A_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
KMT2A_HUMAN -0.27 2.35 1.000.04 1.25 3.22 Concordant
Items per page:
1 – 1 of 1

Motif analysis

KMT2A_HUMAN Concordant
KMT2A_HUMAN pic

Genetic associations

GRASP fasting insulin,  homa-ir,  serum creatinine
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Coronary,  Artery_Tibial,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Minor_Salivary_Gland,  Nerve_Tibial,  Ovary,  Pancreas,  Pituitary,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Stomach,  Testis,  Thyroid,  Whole_Blood

Download