rs10154107 chr21:28136896 C>A
- Sequence
taatgaggctgattcagcctcata[C/A]aaattttgtatgcttcttcataca
- ASB in cell types
- VCaP (prostate carcinoma) LNCaP (prostate carcinoma)
- ASB for transcription factors
- HXB13_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HXB13_HUMAN | -0.87 | 2.11 | 1.75 | 6.16 | Concordant | |||
| FOXA1_HUMAN | n/a | 2.83 | 1.50 | n/a | No Hit |
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Motif analysis
