rs10155688 chr6:188937 G>A
- Sequence
gttgacagatgggtcggtcagcta[G/A]cgtgggcgagaccatagtctccac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) erythroid cells GM18505 (female B-cells Lymphoblastoid Cell Lines) CD14+ monocytes
- ASB for transcription factors
- FOXK2_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXK2_HUMAN | 4.20 | -4.19 | 1.00 | n/a | No Hit | |||
| STAT1_HUMAN | 3.01 | n/a | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP late onset alzheimers disease, resistance to kuru in aged women despite likely exposure, triglycerides