rs10157037 chr1:21468794 G>A
- Sequence
cattctagaaatcaacaagaaatc[G/A]cgcccccagctggcagagaacaaa
- ASB in cell types
- GM18486 (Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines) GM19239 (male B-cells lymphoblastoid cell line) foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.76 | -2.15 | 1.38 | -3.24 | Concordant | |||
| STAG1_HUMAN | 2.25 | -0.36 | 1.00 | n/a | n/a |
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Motif analysis
