rs1016004 chr8:116012792 T>A

Sequence
ccttcaagttcttcaaggatggtg[T/A]cttcacacgctcttaatcacccat
ASB in cell types
bronchial epithelial cells MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant)
ASB for transcription factors
GRHL2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
GRHL2_HUMAN -1.72 2.18 1.002.2·10-6 1.20 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  bipolar disorder,  childhood acute lymphoblastic leukemia,  fasting blood glucose,  fasting insulin,  homa-ir,  infant head circumference,  triglycerides,  urinary albumin-to-creatinine ratio
GTEx eQTL Pancreas

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